Genotypic frequencies for SNPs in an obesity case-control material
SNP . | Lean . | . | . | Obese . | . | . | χ2 . | P value . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
. | 11 . | 12 . | 22 . | 11 . | 12 . | 22 . | . | . | ||||
rs9626055 | 0.957 | 0.043 | 0 | 0.957 | 0.043 | 0 | 0 | 1.00 | ||||
rs2076212* | 0.786 | 0.209 | 0.004 | 0.774 | 0.218 | 0.009 | 0.40 | 0.82 | ||||
rs738409* | 0.521 | 0.423 | 0.056 | 0.611 | 0.355 | 0.034 | 4.26 | 0.12 | ||||
rs5764034 | 0.361 | 0.524 | 0.116 | 0.365 | 0.464 | 0.172 | 3.38 | 0.18 | ||||
rs2076211 | 0.614 | 0.356 | 0.030 | 0.721 | 0.253 | 0.026 | 6.14 | 0.046 | ||||
rs2072907* | 0.560 | 0.397 | 0.043 | 0.701 | 0.269 | 0.030 | 9.99 | 0.0068 | ||||
rs1010022 | 0.568 | 0.397 | 0.034 | 0.709 | 0.261 | 0.030 | 10.36 | 0.0056 | ||||
rs3810622* | 0.339 | 0.524 | 0.137 | 0.313 | 0.476 | 0.210 | 4.32 | 0.12 | ||||
rs2294919 | 0.598 | 0.363 | 0.038 | 0.573 | 0.350 | 0.077 | 3.19 | 0.20 |
SNP . | Lean . | . | . | Obese . | . | . | χ2 . | P value . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
. | 11 . | 12 . | 22 . | 11 . | 12 . | 22 . | . | . | ||||
rs9626055 | 0.957 | 0.043 | 0 | 0.957 | 0.043 | 0 | 0 | 1.00 | ||||
rs2076212* | 0.786 | 0.209 | 0.004 | 0.774 | 0.218 | 0.009 | 0.40 | 0.82 | ||||
rs738409* | 0.521 | 0.423 | 0.056 | 0.611 | 0.355 | 0.034 | 4.26 | 0.12 | ||||
rs5764034 | 0.361 | 0.524 | 0.116 | 0.365 | 0.464 | 0.172 | 3.38 | 0.18 | ||||
rs2076211 | 0.614 | 0.356 | 0.030 | 0.721 | 0.253 | 0.026 | 6.14 | 0.046 | ||||
rs2072907* | 0.560 | 0.397 | 0.043 | 0.701 | 0.269 | 0.030 | 9.99 | 0.0068 | ||||
rs1010022 | 0.568 | 0.397 | 0.034 | 0.709 | 0.261 | 0.030 | 10.36 | 0.0056 | ||||
rs3810622* | 0.339 | 0.524 | 0.137 | 0.313 | 0.476 | 0.210 | 4.32 | 0.12 | ||||
rs2294919 | 0.598 | 0.363 | 0.038 | 0.573 | 0.350 | 0.077 | 3.19 | 0.20 |
Data are presented as frequency. P values calculated using χ2 test. P values <0.05 are considered significant. 1, major allele; 2, minor allele.
Predicted tagSNPs using the Tagger program (Paul de Bakker; http://www.broad.mit.edu/mpg/tagger/).